Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Ccapsularis_CCACVL1_16099 [ CCACVL1_16099] |
contig11014 | 158067 | 165118 | v1 | Corchorus capsularis (Ensembl Plants 51) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Ccapsularis_OMO75676 OMO75676 |
Low | No | 207 | OG0143921 | Get ORF Coding potential... Type: noncoding Potential: -0.606 Folding energies... MFEI: -25.990 AMFE: -0.572 GC content %: 45.411 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Ccapsularis_OMO75676 | SwissProt | 2021-04-01 | Q93V58 | 1.44e-4 |