Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Ccapsularis_CCACVL1_26910 [ CCACVL1_26910] |
contig14573 | 117747 | 118086 | v1 | Corchorus capsularis (Ensembl Plants 51) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Ccapsularis_OMO55899 OMO55899 |
Low | No | 243 | OG0004939 | Get ORF Coding potential... Type: noncoding Potential: -0.298 Folding energies... MFEI: -23.827 AMFE: -0.579 GC content %: 41.152 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Ccapsularis_OMO55899 | SwissProt | 2021-04-01 | Q9FGF6 | 3.54e-8 |