Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Ccardunculus_Ccrd_001270 [ Ccrd_001270] |
scaffold_217 | 199910 | 200916 | v1 | Cynara cardunculus (Ensembl Plants 51) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Ccardunculus_KVH96641 KVH96641 |
Low | No | 228 | OG0153539 | Get ORF Coding potential... Type: noncoding Potential: -1.048 Folding energies... MFEI: -20.263 AMFE: -0.502 GC content %: 40.351 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Ccardunculus_KVH96641 | SwissProt | 2021-04-01 | Q9LIH9 | 2.55e-13 |