Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Ccardunculus_Ccrd_013967 [ Ccrd_013967] |
scaffold_310 | 192142 | 196162 | v1 | Cynara cardunculus (Ensembl Plants 51) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Ccardunculus_KVI07659 KVI07659 |
Low | No | 279 | OG0154227 | Get ORF Coding potential... Type: noncoding Potential: -0.685 Folding energies... MFEI: -27.921 AMFE: -0.573 GC content %: 48.746 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Ccardunculus_KVI07659 | SwissProt | 2021-04-01 | Q8GYK2 | 2.31e-4 |