Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Ccardunculus_Ccrd_015290 [ Ccrd_015290] |
scaffold_97 | 202585 | 202989 | v1 | Cynara cardunculus (Ensembl Plants 51) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Ccardunculus_KVI06385 KVI06385 |
Low | No | 222 | OG0154138 | Get ORF Coding potential... Type: noncoding Potential: -0.918 Folding energies... MFEI: -25.721 AMFE: -0.565 GC content %: 45.495 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Ccardunculus_KVI06385 | SwissProt | 2021-04-01 | P93401 | 1.1e-8 |