Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Ccardunculus_Ccrd_015646 [ Ccrd_015646] |
scaffold_35 | 139155 | 143145 | v1 | Cynara cardunculus (Ensembl Plants 51) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Ccardunculus_KVI06015 KVI06015 |
Low | No | 460 | OG0154115 | Get ORF Coding potential... Type: noncoding Potential: -0.597 Folding energies... MFEI: -27.913 AMFE: -0.594 GC content %: 46.957 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Ccardunculus_KVI06015 | SwissProt | 2021-04-01 | Q9SSB8 | 7.64e-11 |