Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Ccardunculus_Ccrd_020014 [ Ccrd_020014] |
scaffold_4884 | 11154 | 15134 | v1 | Cynara cardunculus (Ensembl Plants 51) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Ccardunculus_KVI01706 KVI01706 |
Low | No | 2324 | OG0030978 | Get ORF Coding potential... Type: noncoding Potential: -0.097 Folding energies... MFEI: -23.967 AMFE: -0.669 GC content %: 35.843 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Ccardunculus_KVI01706 | SwissProt | 2021-04-01 | Q10LP5 | 3.72e-24 |