Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Ccrispus_CHC_T00000178001 [ CHC_T00000178001] |
HG002013 | 12737 | 12994 | v2 | Chondrus crispus (Ensembl Plants 51) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Ccrispus_CDF39248 CDF39248 |
Low | No | 258 | OG0134568 | Get ORF Coding potential... Type: noncoding Potential: -0.232 Folding energies... MFEI: -30.349 AMFE: -0.529 GC content %: 57.364 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Ccrispus_CDF39248 | SwissProt | 2021-04-01 | Q0V7M0 | 1.08e-5 |