Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Ccrispus_CHC_T00002466001 [ CHC_T00002466001] |
HG001664 | 69291 | 69827 | v2 | Chondrus crispus (Ensembl Plants 51) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Ccrispus_CDF33961 CDF33961 |
Low | No | 537 | OG0017680 | Get ORF Coding potential... Type: noncoding Potential: -0.392 Folding energies... MFEI: -27.207 AMFE: -0.566 GC content %: 48.045 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Ccrispus_CDF33961 | SwissProt | 2021-04-01 | O75533 | 3.1e-15 |