Ckanehirae CKAN 01372200

From GreeNC


Gene information
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This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Assembly Species Details

Ckanehirae_CKAN_01372200
[ CKAN_01372200]
CKAN.scaff0005 18724408 18734672 v3 Cinnamomum kanehirae (Phytozome 13)
Coding?
No


Transcript features
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This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Orthologous group Sequence Details

Ckanehirae_CKAN_01372200
CKAN_01372200
High No 345 OG0138135
Coding potential...
Type: noncoding Potential: -0.203
Folding energies...
MFEI: -24.406 AMFE: -0.606
GC content
%: 40.290


Gene models
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Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

Ckanehirae_CKAN_01372200.png