Csativa Csa17g094050

From GreeNC


Gene information
Help.png

This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Assembly Species Details

Csativa_Csa17g094050
[ Csa17g094050]
17 32947142 32947369 v1 Camelina sativa (Ensembl Plants 51)
Coding?
No


Transcript features
Help.png

This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Orthologous group Sequence Details

Csativa_Csa17g094050.1
Csa17g094050.1
High No 228 OG0124425
Coding potential...
Type: noncoding Potential: -0.978
Folding energies...
MFEI: -23.904 AMFE: -0.556
GC content
%: 42.982


Gene models
Help.png

Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

Csativa_Csa17g094050.png