Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Csativus_Csa_1G702010 [ Csa_1G702010] |
1 | 28510974 | 28512510 | v2 | Cucumis sativus (Ensembl Plants 51) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Csativus_KGN66876 KGN66876 |
Low | Yes | 699 | OG0152696 | Get ORF Coding potential... Type: noncoding Potential: -1.570 Folding energies... MFEI: -22.289 AMFE: -0.731 GC content %: 30.472 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Csativus_KGN66876 | Rfam | 14.6 | MIR167_1 | 8.2e-4 |