Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Etef_Et_C8369629-0.0-1.path1 [ Et_C8369629-0.0-1.path1] |
scaffold6909 | 106372 | 106952 | v1 | Eragrostis tef (Ensembl Plants 51) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Etef_Et_C8369629-0.0-1.mrna1 Et_C8369629-0.0-1.mrna1 |
Low | No | 261 | OG0031607 | Get ORF Coding potential... Type: noncoding Potential: -0.054 Folding energies... MFEI: -30.536 AMFE: -0.578 GC content %: 52.874 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Etef_Et_C8369629-0.0-1.mrna1 | SwissProt | 2021-04-01 | Q8L5V0 | 1.9e-22 |