Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Gbarbadense_Gobar.A12G283000 [ Gobar.A12G283000] |
A12 | 98987574 | 98990065 | v1.1 | Gossypium barbadense (Phytozome 13) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Gbarbadense_Gobar.A12G283000.1 Gobar.A12G283000.1 |
High | No | 629 | OG0003980 | Get ORF Coding potential... Type: noncoding Potential: -0.083 Folding energies... MFEI: -21.479 AMFE: -0.603 GC content %: 35.612 | |
Gbarbadense_Gobar.A12G283000.2 Gobar.A12G283000.2 |
High | No | 578 | OG0003980 | Get ORF Coding potential... Type: noncoding Potential: -0.061 Folding energies... MFEI: -21.003 AMFE: -0.575 GC content %: 36.505 |