Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Gbarbadense_Gobar.D05G241500 [ Gobar.D05G241500] |
D05 | 20380188 | 20381969 | v1.1 | Gossypium barbadense (Phytozome 13) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Gbarbadense_Gobar.D05G241500.1 Gobar.D05G241500.1 |
High | No | 1226 | OG0000812 | Get ORF Coding potential... Type: noncoding Potential: -0.784 Folding energies... MFEI: -20.922 AMFE: -0.573 GC content %: 36.542 | |
Gbarbadense_Gobar.D05G241500.2 Gobar.D05G241500.2 |
High | No | 799 | OG0000812 | Get ORF Coding potential... Type: noncoding Potential: -0.733 Folding energies... MFEI: -19.474 AMFE: -0.535 GC content %: 36.421 | |
Gbarbadense_Gobar.D05G241500.3 Gobar.D05G241500.3 |
High | No | 711 | OG0000812 | Get ORF Coding potential... Type: noncoding Potential: -0.718 Folding energies... MFEI: -19.634 AMFE: -0.537 GC content %: 36.568 |