Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Gbarbadense_Gobar.D06G193900 [ Gobar.D06G193900] |
D06 | 55081013 | 55092328 | v1.1 | Gossypium barbadense (Phytozome 13) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Gbarbadense_Gobar.D06G193900.1 Gobar.D06G193900.1 |
High | No | 1036 | OG0018542 | Get ORF Coding potential... Type: noncoding Potential: -0.992 Folding energies... MFEI: -24.807 AMFE: -0.567 GC content %: 43.726 | |
Gbarbadense_Gobar.D06G193900.2 Gobar.D06G193900.2 |
High | No | 845 | OG0018542 | Get ORF Coding potential... Type: noncoding Potential: -1.092 Folding energies... MFEI: -24.142 AMFE: -0.578 GC content %: 41.775 | |
Gbarbadense_Gobar.D06G193900.3 Gobar.D06G193900.3 |
High | No | 929 | OG0018542 | Get ORF Coding potential... Type: noncoding Potential: -1.043 Folding energies... MFEI: -24.499 AMFE: -0.582 GC content %: 42.088 |