Gbarbadense Gobar.D07G186000

From GreeNC


Gene information
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This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Assembly Species Details

Gbarbadense_Gobar.D07G186000
[ Gobar.D07G186000]
D07 33355131 33356050 v1.1 Gossypium barbadense (Phytozome 13)
Coding?
No


Transcript features
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This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Orthologous group Sequence Details

Gbarbadense_Gobar.D07G186000.1
Gobar.D07G186000.1
High No 249 OG0018569
Coding potential...
Type: noncoding Potential: -0.881
Folding energies...
MFEI: -20.964 AMFE: -0.637
GC content
%: 32.932


Gene models
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Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

Gbarbadense_Gobar.D07G186000.png