Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Gdarwinii_Godar.D02G147000 [ Godar.D02G147000] |
D02 | 38339837 | 38341652 | v1.1 | Gossypium darwinii (Phytozome 13) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Gdarwinii_Godar.D02G147000.1 Godar.D02G147000.1 |
High | No | 564 | OG0033457 | Get ORF Coding potential... Type: noncoding Potential: -0.999 Folding energies... MFEI: -22.004 AMFE: -0.640 GC content %: 34.397 | |
Gdarwinii_Godar.D02G147000.2 Godar.D02G147000.2 |
High | No | 542 | OG0033458 | Get ORF Coding potential... Type: noncoding Potential: -0.993 Folding energies... MFEI: -22.399 AMFE: -0.653 GC content %: 34.317 | |
Gdarwinii_Godar.D02G147000.3 Godar.D02G147000.3 |
High | No | 415 | OG0033459 | Get ORF Coding potential... Type: noncoding Potential: -1.110 Folding energies... MFEI: -19.735 AMFE: -0.535 GC content %: 36.867 |