Gdarwinii Godar.D05G386900

From GreeNC


Gene information
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This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Assembly Species Details

Gdarwinii_Godar.D05G386900
[ Godar.D05G386900]
D05 52102686 52103037 v1.1 Gossypium darwinii (Phytozome 13)
Coding?
No


Transcript features
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This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Orthologous group Sequence Details

Gdarwinii_Godar.D05G386900.1
Godar.D05G386900.1
High No 312 OG0172932
Coding potential...
Type: noncoding Potential: -0.764
Folding energies...
MFEI: -23.141 AMFE: -0.587
GC content
%: 39.423


Gene models
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Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

Gdarwinii_Godar.D05G386900.png