Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Gdarwinii_Godar.D08G008800 [ Godar.D08G008800] |
D08 | 572758 | 574535 | v1.1 | Gossypium darwinii (Phytozome 13) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Gdarwinii_Godar.D08G008800.1 Godar.D08G008800.1 |
High | No | 663 | OG0173139 | Get ORF Coding potential... Type: noncoding Potential: -1.038 Folding energies... MFEI: -23.646 AMFE: -0.679 GC content %: 34.842 | |
Gdarwinii_Godar.D08G008800.2 Godar.D08G008800.2 |
High | No | 661 | OG0008169 | Get ORF Coding potential... Type: noncoding Potential: -1.037 Folding energies... MFEI: -23.585 AMFE: -0.681 GC content %: 34.644 |