| Gene alias | Chrom. | Start | End | Num. of lncRNAs |
|---|---|---|---|---|
| Athaliana AT1G28265 | Chr1 | 9879035 | 9879310 | 1 |
| Athaliana AT1G28375 | Chr1 | 9961055 | 9961745 | 1 |
| Athaliana AT1G28395 | Chr1 | 9969246 | 9971681 | 6 |
| Athaliana AT1G28540 | Chr1 | 10035617 | 10037403 | 1 |
| Athaliana AT1G28815 | Chr1 | 10095674 | 10096374 | 1 |
| Athaliana AT1G28765 | Chr1 | 10105047 | 10107645 | 2 |
| Athaliana AT1G29005 | Chr1 | 10114912 | 10115749 | 1 |
| Athaliana AT1G29535 | Chr1 | 10327138 | 10329116 | 4 |
| Athaliana AT1G29580 | Chr1 | 10338443 | 10339146 | 1 |
| Athaliana AT1G29775 | Chr1 | 10425622 | 10426947 | 1 |
| Athaliana AT1G30250 | Chr1 | 10646842 | 10647650 | 1 |
| Athaliana AT1G30260 | Chr1 | 10650914 | 10651829 | 1 |
| Athaliana AT1G30757 | Chr1 | 10908980 | 10909784 | 2 |
| Athaliana AT1G30795 | Chr1 | 10935684 | 10936396 | 1 |
| Athaliana AT1G30845 | Chr1 | 10979646 | 10980725 | 1 |
| Athaliana AT1G30880 | Chr1 | 10993002 | 10994152 | 1 |
| Athaliana AT1G30972 | Chr1 | 11044628 | 11045466 | 3 |
| Athaliana AT1G30974 | Chr1 | 11046969 | 11047816 | 2 |
| Athaliana AT1G31095 | Chr1 | 11102778 | 11103644 | 1 |
| Athaliana AT1G31175 | Chr1 | 11140471 | 11142716 | 2 |
| Athaliana AT1G31270 | Chr1 | 11178349 | 11179203 | 1 |
| Athaliana AT1G31335 | Chr1 | 11216810 | 11217546 | 1 |
| Athaliana AT1G31555 | Chr1 | 11297813 | 11298409 | 1 |
| Athaliana AT1G31620 | Chr1 | 11316941 | 11317894 | 1 |
| Athaliana AT1G32225 | Chr1 | 11610114 | 11610625 | 1 |
| Athaliana AT1G32280 | Chr1 | 11646189 | 11647001 | 1 |
| Athaliana AT1G32460 | Chr1 | 11738118 | 11739326 | 1 |
| Athaliana AT1G32570 | Chr1 | 11776765 | 11777557 | 2 |
| Athaliana AT1G32575 | Chr1 | 11780623 | 11781703 | 1 |
| Athaliana AT1G32920 | Chr1 | 11928757 | 11929993 | 1 |
| Athaliana AT1G32928 | Chr1 | 11931149 | 11931801 | 1 |
| Athaliana AT1G33055 | Chr1 | 11971308 | 11972580 | 1 |
| Athaliana AT1G33102 | Chr1 | 12002238 | 12003005 | 1 |
| Athaliana AT1G33640 | Chr1 | 12195722 | 12196223 | 1 |
| Athaliana AT1G33945 | Chr1 | 12331977 | 12332469 | 1 |
| Athaliana AT1G34042 | Chr1 | 12379427 | 12379703 | 1 |
| Athaliana AT1G34046 | Chr1 | 12388595 | 12389447 | 1 |
| Athaliana AT1G34317 | Chr1 | 12516112 | 12516555 | 1 |
| Athaliana AT1G34792 | Chr1 | 12766263 | 12766651 | 1 |
| Athaliana AT1G34795 | Chr1 | 12769644 | 12770131 | 1 |
| Athaliana AT1G34800 | Chr1 | 12773164 | 12773442 | 1 |
| Athaliana AT1G34805 | Chr1 | 12776578 | 12776856 | 1 |
| Athaliana AT1G34810 | Chr1 | 12779992 | 12780270 | 1 |
| Athaliana AT1G34815 | Chr1 | 12783406 | 12783684 | 1 |
| Athaliana AT1G34820 | Chr1 | 12786817 | 12787095 | 1 |
| Athaliana AT1G34825 | Chr1 | 12790122 | 12790605 | 1 |
| Athaliana AT1G34830 | Chr1 | 12793536 | 12794023 | 1 |
| Athaliana AT1G34840 | Chr1 | 12796984 | 12797247 | 1 |
| Athaliana AT1G34850 | Chr1 | 12800308 | 12800571 | 1 |
| Athaliana AT1G34860 | Chr1 | 12803708 | 12803986 | 1 |