| Gene alias | Chrom. | Start | End | Num. of lncRNAs |
|---|---|---|---|---|
| Athaliana AT1G01170 | Chr1 | 73931 | 74737 | 2 |
| Athaliana AT1G01725 | Chr1 | 269792 | 270859 | 1 |
| Athaliana AT1G02067 | Chr1 | 366945 | 367166 | 1 |
| Athaliana AT1G02160 | Chr1 | 410744 | 411632 | 2 |
| Athaliana AT1G02490 | Chr1 | 516569 | 516866 | 1 |
| Athaliana AT1G02710 | Chr1 | 589706 | 589996 | 1 |
| Athaliana AT1G03106 | Chr1 | 748101 | 749034 | 1 |
| Athaliana AT1G03165 | Chr1 | 766336 | 767324 | 1 |
| Athaliana AT1G03200 | Chr1 | 780519 | 782946 | 1 |
| Athaliana AT1G03240 | Chr1 | 792222 | 793060 | 1 |
| Athaliana AT1G03395 | Chr1 | 841677 | 842158 | 1 |
| Athaliana AT1G03660 | Chr1 | 911310 | 913808 | 2 |
| Athaliana AT1G04105 | Chr1 | 1059730 | 1060348 | 1 |
| Athaliana AT1G04330 | Chr1 | 1161289 | 1161982 | 1 |
| Athaliana AT1G04455 | Chr1 | 1210269 | 1210622 | 1 |
| Athaliana AT1G04778 | Chr1 | 1339588 | 1340565 | 1 |
| Athaliana AT1G04895 | Chr1 | 1383008 | 1383422 | 1 |
| Athaliana AT1G05205 | Chr1 | 1509103 | 1510341 | 1 |
| Athaliana AT1G05340 | Chr1 | 1558778 | 1559917 | 1 |
| Athaliana AT1G05450 | Chr1 | 1599876 | 1601214 | 1 |
| Athaliana AT1G05575 | Chr1 | 1661550 | 1662259 | 1 |
| Athaliana AT1G05780 | Chr1 | 1726558 | 1728520 | 1 |
| Athaliana AT1G05783 | Chr1 | 1728658 | 1729789 | 1 |
| Athaliana AT1G06010 | Chr1 | 1822583 | 1824236 | 1 |
| Athaliana AT1G06045 | Chr1 | 1829522 | 1829865 | 1 |
| Athaliana AT1G06135 | Chr1 | 1862184 | 1862742 | 1 |
| Athaliana AT1G06137 | Chr1 | 1863425 | 1863840 | 1 |
| Athaliana AT1G06148 | Chr1 | 1874885 | 1877573 | 2 |
| Athaliana AT1G06475 | Chr1 | 1973834 | 1974407 | 1 |
| Athaliana AT1G06515 | Chr1 | 1990634 | 1992228 | 2 |
| Athaliana AT1G07485 | Chr1 | 2301375 | 2302121 | 1 |
| Athaliana AT1G07490 | Chr1 | 2301380 | 2302021 | 1 |
| Athaliana AT1G07610 | Chr1 | 2341447 | 2342148 | 1 |
| Athaliana AT1G07795 | Chr1 | 2414143 | 2414967 | 1 |
| Athaliana AT1G07885 | Chr1 | 2435858 | 2436861 | 2 |
| Athaliana AT1G07902 | Chr1 | 2443918 | 2445140 | 1 |
| Athaliana AT1G08005 | Chr1 | 2485281 | 2485724 | 1 |
| Athaliana AT1G08120 | Chr1 | 2538615 | 2539661 | 1 |
| Athaliana AT1G08165 | Chr1 | 2561449 | 2562316 | 1 |
| Athaliana AT1G08390 | Chr1 | 2642072 | 2643285 | 1 |
| Athaliana AT1G09625 | Chr1 | 3117137 | 3117567 | 1 |
| Athaliana AT1G09645 | Chr1 | 3122926 | 3124667 | 1 |
| Athaliana AT1G09794 | Chr1 | 3171905 | 3173510 | 1 |
| Athaliana AT1G09995 | Chr1 | 3262222 | 3263642 | 1 |
| Athaliana AT1G10225 | Chr1 | 3354243 | 3354856 | 1 |
| Athaliana AT1G10395 | Chr1 | 3412474 | 3412742 | 1 |
| Athaliana AT1G10657 | Chr1 | 3530353 | 3532017 | 2 |
| Athaliana AT1G10800 | Chr1 | 3598069 | 3598885 | 1 |
| Athaliana AT1G10865 | Chr1 | 3614513 | 3616308 | 2 |
| Athaliana AT1G11112 | Chr1 | 3712971 | 3713735 | 1 |