| Gene alias | Chrom. | Start | End | Num. of lncRNAs |
|---|---|---|---|---|
| Athaliana AT1G11572 | Chr1 | 3884342 | 3884960 | 1 |
| Athaliana AT1G11655 | Chr1 | 3919237 | 3919869 | 1 |
| Athaliana AT1G11684 | Chr1 | 3941103 | 3941459 | 1 |
| Athaliana AT1G11785 | Chr1 | 3979823 | 3981079 | 1 |
| Athaliana AT1G11850 | Chr1 | 3999157 | 4000024 | 4 |
| Athaliana AT1G11970 | Chr1 | 4044370 | 4044669 | 1 |
| Athaliana AT1G12064 | Chr1 | 4077498 | 4078095 | 1 |
| Athaliana AT1G12080 | Chr1 | 4084162 | 4085185 | 1 |
| Athaliana AT1G12180 | Chr1 | 4130396 | 4131168 | 1 |
| Athaliana AT1G12211 | Chr1 | 4140875 | 4144114 | 1 |
| Athaliana AT1G12805 | Chr1 | 4366577 | 4367136 | 1 |
| Athaliana AT1G12845 | Chr1 | 4378832 | 4379607 | 1 |
| Athaliana AT1G13143 | Chr1 | 4479025 | 4479709 | 1 |
| Athaliana AT1G13245 | Chr1 | 4525414 | 4526204 | 1 |
| Athaliana AT1G13825 | Chr1 | 4738441 | 4739345 | 1 |
| Athaliana AT1G14048 | Chr1 | 4815683 | 4815988 | 1 |
| Athaliana AT1G14453 | Chr1 | 4947121 | 4947976 | 1 |
| Athaliana AT1G14455 | Chr1 | 4947819 | 4948400 | 1 |
| Athaliana AT1G15270 | Chr1 | 5250650 | 5252121 | 1 |
| Athaliana AT1G15350 | Chr1 | 5278027 | 5279988 | 4 |
| Athaliana AT1G15385 | Chr1 | 5292712 | 5293338 | 1 |
| Athaliana AT1G15415 | Chr1 | 5300742 | 5301489 | 1 |
| Athaliana AT1G15885 | Chr1 | 5460477 | 5461297 | 1 |
| Athaliana AT1G15900 | Chr1 | 5464273 | 5464947 | 1 |
| Athaliana AT1G16000 | Chr1 | 5494533 | 5495359 | 1 |
| Athaliana AT1G16025 | Chr1 | 5501505 | 5501959 | 1 |
| Athaliana AT1G16170 | Chr1 | 5538666 | 5540002 | 1 |
| Athaliana AT1G16515 | Chr1 | 5647462 | 5648114 | 2 |
| Athaliana AT1G16916 | Chr1 | 5786557 | 5787329 | 2 |
| Athaliana AT1G17090 | Chr1 | 5842168 | 5844367 | 5 |
| Athaliana AT1G17235 | Chr1 | 5895351 | 5896250 | 1 |
| Athaliana AT1G17285 | Chr1 | 5920542 | 5921483 | 1 |
| Athaliana AT1G17300 | Chr1 | 5926636 | 5927784 | 1 |
| Athaliana AT1G17490 | Chr1 | 6008437 | 6009420 | 1 |
| Athaliana AT1G18193 | Chr1 | 6262602 | 6263258 | 1 |
| Athaliana AT1G18197 | Chr1 | 6263682 | 6264925 | 1 |
| Athaliana AT1G18486 | Chr1 | 6366397 | 6366753 | 1 |
| Athaliana AT1G18773 | Chr1 | 6474802 | 6475979 | 3 |
| Athaliana AT1G18975 | Chr1 | 6554683 | 6557974 | 1 |
| Athaliana AT1G19020 | Chr1 | 6568002 | 6568705 | 1 |
| Athaliana AT1G19240 | Chr1 | 6649243 | 6650446 | 1 |
| Athaliana AT1G19394 | Chr1 | 6709773 | 6710670 | 1 |
| Athaliana AT1G19396 | Chr1 | 6709778 | 6711788 | 3 |
| Athaliana AT1G19397 | Chr1 | 6710851 | 6711787 | 1 |
| Athaliana AT1G19500 | Chr1 | 6754665 | 6755684 | 1 |
| Athaliana AT1G19530 | Chr1 | 6763765 | 6765049 | 2 |
| Athaliana AT1G19610 | Chr1 | 6781483 | 6782216 | 1 |
| Athaliana AT1G19960 | Chr1 | 6927736 | 6928656 | 1 |
| Athaliana AT1G20065 | Chr1 | 6956374 | 6958075 | 5 |
| Athaliana AT1G20405 | Chr1 | 7077116 | 7077606 | 1 |