| Gene alias | Chrom. | Start | End | Num. of lncRNAs |
|---|---|---|---|---|
| Zmays Zm00001d027231 | 1 | 50877 | 55716 | 1 |
| Zmays Zm00001d027232 | 1 | 92299 | 95134 | 1 |
| Zmays Zm00001d027236 | 1 | 138378 | 139043 | 1 |
| Zmays Zm00001d027239 | 1 | 196942 | 199159 | 4 |
| Zmays Zm00001d027240 | 1 | 199345 | 205715 | 5 |
| Zmays Zm00001d027250 | 1 | 337772 | 338047 | 1 |
| Zmays Zm00001d027257 | 1 | 560956 | 568038 | 3 |
| Zmays Zm00001d027258 | 1 | 689056 | 689704 | 1 |
| Zmays Zm00001d027269 | 1 | 1044482 | 1044694 | 1 |
| Zmays Zm00001d027271 | 1 | 1067813 | 1073269 | 17 |
| Zmays Zm00001d027273 | 1 | 1198058 | 1206947 | 1 |
| Zmays Zm00001d027309 | 1 | 2629289 | 2635834 | 1 |
| Zmays Zm00001d027319 | 1 | 2869707 | 2878262 | 1 |
| Zmays Zm00001d027340 | 1 | 3272230 | 3288228 | 1 |
| Zmays Zm00001d027360 | 1 | 3691497 | 3691825 | 1 |
| Zmays Zm00001d027375 | 1 | 3971512 | 3972133 | 1 |
| Zmays Zm00001d027385 | 1 | 4118697 | 4120755 | 1 |
| Zmays Zm00001d027388 | 1 | 4143058 | 4147651 | 1 |
| Zmays Zm00001d027395 | 1 | 4341041 | 4351530 | 1 |
| Zmays Zm00001d027402 | 1 | 4417830 | 4421059 | 1 |
| Zmays Zm00001d027408 | 1 | 4604071 | 4604541 | 1 |
| Zmays Zm00001d027417 | 1 | 4846995 | 4847327 | 1 |
| Zmays Zm00001d027447 | 1 | 5496540 | 5500644 | 1 |
| Zmays Zm00001d027454 | 1 | 5603127 | 5604467 | 1 |
| Zmays Zm00001d027458 | 1 | 5701680 | 5704055 | 1 |
| Zmays Zm00001d027500 | 1 | 6797799 | 6798604 | 1 |
| Zmays Zm00001d027515 | 1 | 7238508 | 7259024 | 2 |
| Zmays Zm00001d027531 | 1 | 7548894 | 7549193 | 1 |
| Zmays Zm00001d027536 | 1 | 7686285 | 7701265 | 2 |
| Zmays Zm00001d027577 | 1 | 8339277 | 8357146 | 2 |
| Zmays Zm00001d027588 | 1 | 8552388 | 8557230 | 3 |
| Zmays Zm00001d027595 | 1 | 8661846 | 8665065 | 1 |
| Zmays Zm00001d027619 | 1 | 9119707 | 9122688 | 1 |
| Zmays Zm00001d027631 | 1 | 9497951 | 9498772 | 1 |
| Zmays Zm00001d027662 | 1 | 10425445 | 10427529 | 1 |
| Zmays Zm00001d027672 | 1 | 10687116 | 10690173 | 1 |
| Zmays Zm00001d027674 | 1 | 10755659 | 10757365 | 1 |
| Zmays Zm00001d027681 | 1 | 11065460 | 11065705 | 1 |
| Zmays Zm00001d027687 | 1 | 11155935 | 11156159 | 1 |
| Zmays Zm00001d027713 | 1 | 11783331 | 11784682 | 1 |
| Zmays Zm00001d027733 | 1 | 12365001 | 12366093 | 1 |
| Zmays Zm00001d027745 | 1 | 12528993 | 12531966 | 2 |
| Zmays Zm00001d027746 | 1 | 12532781 | 12533074 | 1 |
| Zmays Zm00001d027747 | 1 | 12535191 | 12535893 | 1 |
| Zmays Zm00001d027752 | 1 | 12628889 | 12640144 | 5 |
| Zmays Zm00001d027761 | 1 | 13027209 | 13027778 | 1 |
| Zmays Zm00001d027772 | 1 | 13250766 | 13250972 | 1 |
| Zmays Zm00001d027787 | 1 | 13461684 | 13461890 | 1 |
| Zmays Zm00001d027788 | 1 | 13475153 | 13483253 | 22 |
| Zmays Zm00001d027792 | 1 | 13619804 | 13620061 | 1 |