Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Ghirsutum_Gohir.A09G035800 [ Gohir.A09G035800] |
A09 | 16731460 | 16738094 | v2.1 | Gossypium hirsutum (Phytozome 13) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Ghirsutum_Gohir.A09G035800.1 Gohir.A09G035800.1 |
High | No | 474 | OG0005067 | Get ORF Coding potential... Type: noncoding Potential: -1.122 Folding energies... MFEI: -24.747 AMFE: -0.602 GC content %: 41.139 | |
Ghirsutum_Gohir.A09G035800.2 Gohir.A09G035800.2 |
High | No | 640 | OG0005067 | Get ORF Coding potential... Type: noncoding Potential: -1.190 Folding energies... MFEI: -20.625 AMFE: -0.670 GC content %: 30.781 | |
Ghirsutum_Gohir.A09G035800.3 Gohir.A09G035800.3 |
High | No | 477 | OG0005067 | Get ORF Coding potential... Type: noncoding Potential: -1.123 Folding energies... MFEI: -24.109 AMFE: -0.584 GC content %: 41.300 |