Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Ghirsutum_Gohir.D01G123700 [ Gohir.D01G123700] |
D01 | 29852451 | 29853545 | v2.1 | Gossypium hirsutum (Phytozome 13) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Ghirsutum_Gohir.D01G123700.1 Gohir.D01G123700.1 |
High | No | 671 | OG0005139 | Get ORF Coding potential... Type: noncoding Potential: -0.910 Folding energies... MFEI: -21.699 AMFE: -0.564 GC content %: 38.450 | |
Ghirsutum_Gohir.D01G123700.2 Gohir.D01G123700.2 |
High | No | 468 | OG0033991 | Get ORF Coding potential... Type: noncoding Potential: -0.845 Folding energies... MFEI: -24.466 AMFE: -0.606 GC content %: 40.385 |