Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Ghirsutum_Gohir.D07G128950 [ Gohir.D07G128950] |
D07 | 19698085 | 19699654 | v2.1 | Gossypium hirsutum (Phytozome 13) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Ghirsutum_Gohir.D07G128950.1 Gohir.D07G128950.1 |
High | No | 592 | OG0011734 | Get ORF Coding potential... Type: noncoding Potential: -1.057 Folding energies... MFEI: -20.591 AMFE: -0.575 GC content %: 35.811 | |
Ghirsutum_Gohir.D07G128950.2 Gohir.D07G128950.2 |
High | No | 523 | OG0175362 | Get ORF Coding potential... Type: noncoding Potential: -1.041 Folding energies... MFEI: -20.229 AMFE: -0.572 GC content %: 35.373 | |
Ghirsutum_Gohir.D07G128950.3 Gohir.D07G128950.3 |
High | No | 475 | OG0175363 | Get ORF Coding potential... Type: noncoding Potential: -1.029 Folding energies... MFEI: -17.495 AMFE: -0.516 GC content %: 33.895 |