Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Gmax_Glyma.12G182500 [ Glyma.12G182500] |
Gm12 | 35828698 | 35831023 | A4v1 | Glycine max (Phytozome 13) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Gmax_Glyma.12G182500.4 Glyma.12G182500.4 |
High | No | 854 | OG0001608 | Get ORF Coding potential... Type: noncoding Potential: -1.084 Folding energies... MFEI: -19.660 AMFE: -0.535 GC content %: 36.768 | |
Gmax_Glyma.12G182500.5 Glyma.12G182500.5 |
High | No | 204 | OG0001608 | Get ORF Coding potential... Type: noncoding Potential: -0.809 Folding energies... MFEI: -14.216 AMFE: -0.362 GC content %: 39.216 | |
Gmax_Glyma.12G182500.6 Glyma.12G182500.6 |
High | No | 709 | OG0001608 | Get ORF Coding potential... Type: noncoding Potential: -1.116 Folding energies... MFEI: -20.423 AMFE: -0.540 GC content %: 37.800 | |
Gmax_Glyma.12G182500.7 Glyma.12G182500.7 |
High | No | 774 | OG0001608 | Get ORF Coding potential... Type: noncoding Potential: -1.142 Folding energies... MFEI: -22.610 AMFE: -0.599 GC content %: 37.726 | |
Gmax_Glyma.12G182500.8 Glyma.12G182500.8 |
High | No | 750 | OG0001608 | Get ORF Coding potential... Type: noncoding Potential: -1.136 Folding energies... MFEI: -22.547 AMFE: -0.602 GC content %: 37.467 |