Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Gmustelinum_Gomus.A08G015800 [ Gomus.A08G015800] |
A08 | 1191331 | 1192668 | v1.1 | Gossypium mustelinum (Phytozome 13) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Gmustelinum_Gomus.A08G015800.1 Gomus.A08G015800.1 |
High | No | 635 | OG0001367 | Get ORF Coding potential... Type: noncoding Potential: -0.655 Folding energies... MFEI: -22.677 AMFE: -0.634 GC content %: 35.748 | |
Gmustelinum_Gomus.A08G015800.2 Gomus.A08G015800.2 |
High | No | 623 | OG0176591 | Get ORF Coding potential... Type: noncoding Potential: -0.641 Folding energies... MFEI: -23.162 AMFE: -0.650 GC content %: 35.634 | |
Gmustelinum_Gomus.A08G015800.3 Gomus.A08G015800.3 |
High | No | 479 | OG0001367 | Get ORF Coding potential... Type: noncoding Potential: -0.573 Folding energies... MFEI: -20.793 AMFE: -0.604 GC content %: 34.447 |