Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Gmustelinum_Gomus.D10G215500 [ Gomus.D10G215500] |
D10 | 55008802 | 55009505 | v1.1 | Gossypium mustelinum (Phytozome 13) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Gmustelinum_Gomus.D10G215500.1 Gomus.D10G215500.1 |
High | No | 502 | OG0001372 | Get ORF Coding potential... Type: noncoding Potential: -1.170 Folding energies... MFEI: -23.904 AMFE: -0.580 GC content %: 41.235 | |
Gmustelinum_Gomus.D10G215500.2 Gomus.D10G215500.2 |
High | No | 484 | OG0001372 | Get ORF Coding potential... Type: noncoding Potential: -1.161 Folding energies... MFEI: -22.665 AMFE: -0.557 GC content %: 40.702 |