Graimondii B456 004G150900

From GreeNC


Gene information
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This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Assembly Species Details

Graimondii_B456_004G150900
[ B456_004G150900]
4 42719781 42720127 v6 Gossypium raimondii (Ensembl Plants 51)
Coding?
No


Transcript features
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This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Orthologous group Sequence Details

Graimondii_KJB24552
KJB24552
High No 347 OG0178913
Coding potential...
Type: noncoding Potential: -0.943
Folding energies...
MFEI: -24.409 AMFE: -0.543
GC content
%: 44.957


Gene models
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Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

Graimondii_B456_004G150900.png