Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Graimondii_B456_006G262100 [ B456_006G262100] |
6 | 50233097 | 50234060 | v6 | Gossypium raimondii (Ensembl Plants 51) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Graimondii_KJB38552 KJB38552 |
Low | Yes | 964 | OG0008219 | Get ORF Coding potential... Type: noncoding Potential: -0.579 Folding energies... MFEI: -33.423 AMFE: -0.756 GC content %: 44.191 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Graimondii_KJB38552 | Rfam | 14.6 | mir-598 | 6.2e-5 |