Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Graimondii_B456_009G131200 [ B456_009G131200] |
9 | 9851821 | 9853468 | v6 | Gossypium raimondii (Ensembl Plants 51) | Coding? Yes |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Graimondii_KJB56669 KJB56669 |
High | No | 1546 | OG0005648 | Get ORF Coding potential... Type: noncoding Potential: -1.133 Folding energies... MFEI: -23.803 AMFE: -0.646 GC content %: 36.869 | |
Graimondii_KJB56671 KJB56671 |
High | No | 252 | OG0179585 | Get ORF Coding potential... Type: noncoding Potential: -0.924 Folding energies... MFEI: -20.238 AMFE: -0.378 GC content %: 53.571 |