Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Graimondii_B456_011G1329002 [ B456_011G1329002] |
11 | 20173326 | 20174712 | v6 | Gossypium raimondii (Ensembl Plants 51) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Graimondii_KJB68877 KJB68877 |
High | No | 1373 | OG0019398 | Get ORF Coding potential... Type: noncoding Potential: -0.761 Folding energies... MFEI: -23.984 AMFE: -0.676 GC content %: 35.470 | |
Graimondii_KJB68878 KJB68878 |
High | No | 1387 | OG0019398 | Get ORF Coding potential... Type: noncoding Potential: -0.762 Folding energies... MFEI: -23.742 AMFE: -0.675 GC content %: 35.184 | |
Graimondii_KJB68879 KJB68879 |
High | No | 255 | OG0019398 | Get ORF Coding potential... Type: noncoding Potential: -0.361 Folding energies... MFEI: -27.451 AMFE: -0.614 GC content %: 44.706 |