Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Gtomentosum_Gotom.A01G064000 [ Gotom.A01G064000] |
A01 | 6532431 | 6534794 | v1.1 | Gossypium tomentosum (Phytozome 13) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Gtomentosum_Gotom.A01G064000.1 Gotom.A01G064000.1 |
High | No | 840 | OG0001026 | Get ORF Coding potential... Type: noncoding Potential: -1.077 Folding energies... MFEI: -24.429 AMFE: -0.595 GC content %: 41.071 | |
Gtomentosum_Gotom.A01G064000.2 Gotom.A01G064000.2 |
High | No | 732 | OG0001026 | Get ORF Coding potential... Type: noncoding Potential: -1.048 Folding energies... MFEI: -24.918 AMFE: -0.596 GC content %: 41.803 | |
Gtomentosum_Gotom.A01G064000.3 Gotom.A01G064000.3 |
High | No | 644 | OG0001026 | Get ORF Coding potential... Type: noncoding Potential: -1.019 Folding energies... MFEI: -24.239 AMFE: -0.587 GC content %: 41.304 |