Gtomentosum Gotom.A04G049400

From GreeNC


Gene information
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This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Assembly Species Details

Gtomentosum_Gotom.A04G049400
[ Gotom.A04G049400]
A04 8122645 8122845 v1.1 Gossypium tomentosum (Phytozome 13)
Coding?
No


Transcript features
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This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Orthologous group Sequence Details

Gtomentosum_Gotom.A04G049400.1
Gotom.A04G049400.1
High No 201 OG0018089
Coding potential...
Type: noncoding Potential: -0.916
Folding energies...
MFEI: -18.856 AMFE: -0.480
GC content
%: 39.303


Gene models
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Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

Gtomentosum_Gotom.A04G049400.png