Gtomentosum Gotom.D04G090500

From GreeNC


Gene information
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This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Assembly Species Details

Gtomentosum_Gotom.D04G090500
[ Gotom.D04G090500]
D04 15163436 15163645 v1.1 Gossypium tomentosum (Phytozome 13)
Coding?
No


Transcript features
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This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Orthologous group Sequence Details

Gtomentosum_Gotom.D04G090500.1
Gotom.D04G090500.1
High No 210 OG0182340
Coding potential...
Type: noncoding Potential: -0.353
Folding energies...
MFEI: -28.762 AMFE: -0.636
GC content
%: 45.238


Gene models
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Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

Gtomentosum_Gotom.D04G090500.png