Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Hannuus_HanXRQChr00c0040g0571281 [ HanXRQChr00c0040g0571281] |
HanXRQChr00c0040 | 40196 | 40911 | r1.2 | Helianthus annuus (Phytozome 13) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Hannuus_HanXRQChr00c0040g0571281 HanXRQChr00c0040g0571281 |
Low | No | 415 | OG0183680 | Get ORF Coding potential... Type: noncoding Potential: -0.996 Folding energies... MFEI: -27.422 AMFE: -0.590 GC content %: 46.506 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Hannuus_HanXRQChr00c0040g0571281 | RepBase (RepeatMasker) | 2014-01-31 | DNA/PIF-Harbinger |