Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Hannuus_HanXRQChr03g0080461 [ HanXRQChr03g0080461] |
HanXRQChr03 | 127896125 | 127896650 | r1.2 | Helianthus annuus (Phytozome 13) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Hannuus_HanXRQChr03g0080461 HanXRQChr03g0080461 |
Low | No | 347 | OG0184806 | Get ORF Coding potential... Type: noncoding Potential: -0.939 Folding energies... MFEI: -25.159 AMFE: -0.578 GC content %: 43.516 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Hannuus_HanXRQChr03g0080461 | RepBase (RepeatMasker) | 2014-01-31 | LINE/L1 |