Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Hannuus_HanXRQChr05g0153461 [ HanXRQChr05g0153461] |
HanXRQChr05 | 180240397 | 180240971 | r1.2 | Helianthus annuus (Phytozome 13) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Hannuus_HanXRQChr05g0153461 HanXRQChr05g0153461 |
Low | No | 299 | OG0019447 | Get ORF Coding potential... Type: noncoding Potential: -1.040 Folding energies... MFEI: -23.779 AMFE: -0.494 GC content %: 48.161 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Hannuus_HanXRQChr05g0153461 | SwissProt | 2021-04-01 | Q9SXC8 | 1.95e-6 |