Hannuus HanXRQChr08g0229501

From GreeNC


Gene information
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This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Assembly Species Details

Hannuus_HanXRQChr08g0229501
[ HanXRQChr08g0229501]
HanXRQChr08 99232967 99234239 r1.2 Helianthus annuus (Phytozome 13)
Coding?
No


Transcript features
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This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Orthologous group Sequence Details

Hannuus_HanXRQChr08g0229501
HanXRQChr08g0229501
High No 954 OG0186596
Coding potential...
Type: noncoding Potential: -0.916
Folding energies...
MFEI: -23.543 AMFE: -0.704
GC content
%: 33.438


Gene models
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Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

Hannuus_HanXRQChr08g0229501.png