Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Hannuus_HanXRQChr08g0236451 [ HanXRQChr08g0236451] |
HanXRQChr08 | 146945144 | 146948104 | r1.2 | Helianthus annuus (Phytozome 13) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Hannuus_HanXRQChr08g0236451 HanXRQChr08g0236451 |
Low | No | 1656 | OG0186694 | Get ORF Coding potential... Type: noncoding Potential: -1.311 Folding energies... MFEI: -25.719 AMFE: -0.605 GC content %: 42.512 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Hannuus_HanXRQChr08g0236451 | RepBase (RepeatMasker) | 2014-01-31 | LTR/Copia |