Hannuus HanXRQChr10g0299891

From GreeNC


Gene information
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This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Assembly Species Details

Hannuus_HanXRQChr10g0299891
[ HanXRQChr10g0299891]
HanXRQChr10 150203812 150220974 r1.2 Helianthus annuus (Phytozome 13)
Coding?
No


Transcript features
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This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Orthologous group Sequence Details

Hannuus_HanXRQChr10g0299891
HanXRQChr10g0299891
High No 347 OG0187522
Coding potential...
Type: noncoding Potential: -0.770
Folding energies...
MFEI: -18.444 AMFE: -0.489
GC content
%: 37.752


Gene models
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Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

Hannuus_HanXRQChr10g0299891.png