Hannuus HanXRQChr12g0358961

From GreeNC


Gene information
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This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Assembly Species Details

Hannuus_HanXRQChr12g0358961
[ HanXRQChr12g0358961]
HanXRQChr12 15509933 15510567 r1.2 Helianthus annuus (Phytozome 13)
Coding?
No


Transcript features
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This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Orthologous group Sequence Details

Hannuus_HanXRQChr12g0358961
HanXRQChr12g0358961
High No 347 OG0188244
Coding potential...
Type: noncoding Potential: -0.891
Folding energies...
MFEI: -23.084 AMFE: -0.585
GC content
%: 39.481


Gene models
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Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

Hannuus_HanXRQChr12g0358961.png