Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Hannuus_HanXRQChr12g0367261 [ HanXRQChr12g0367261] |
HanXRQChr12 | 45699819 | 45701454 | r1.2 | Helianthus annuus (Phytozome 13) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Hannuus_HanXRQChr12g0367261 HanXRQChr12g0367261 |
Low | No | 730 | OG0188339 | Get ORF Coding potential... Type: noncoding Potential: -1.005 Folding energies... MFEI: -22.822 AMFE: -0.646 GC content %: 35.342 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Hannuus_HanXRQChr12g0367261 | SwissProt | 2021-04-01 | Q7DMA9 | 3.23e-7 |