Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Hannuus_HanXRQChr16g0523121 [ HanXRQChr16g0523121] |
HanXRQChr16 | 148474796 | 148475570 | r1.2 | Helianthus annuus (Phytozome 13) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Hannuus_HanXRQChr16g0523121 HanXRQChr16g0523121 |
Low | No | 662 | OG0035125 | Get ORF Coding potential... Type: noncoding Potential: -1.040 Folding energies... MFEI: -32.689 AMFE: -0.666 GC content %: 49.094 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Hannuus_HanXRQChr16g0523121 | RepBase (RepeatMasker) | 2014-01-31 | LTR/Copia |