Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Hvulgare_HORVU0Hr1G027980 [ HORVU0Hr1G027980] |
chrUn | 148546629 | 148551584 | r1 | Hordeum vulgare (Phytozome 13) | Coding? Yes |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Hvulgare_HORVU0Hr1G027980.1 HORVU0Hr1G027980.1 |
High | No | 315 | OG0005673 | Get ORF Coding potential... Type: noncoding Potential: -0.439 Folding energies... MFEI: -23.460 AMFE: -0.637 GC content %: 36.825 | |
Hvulgare_HORVU0Hr1G027980.3 HORVU0Hr1G027980.3 |
High | No | 260 | OG0192245 | Get ORF Coding potential... Type: noncoding Potential: -0.910 Folding energies... MFEI: -15.192 AMFE: -0.494 GC content %: 30.769 |