Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Hvulgare_HORVU1Hr1G026140 [ HORVU1Hr1G026140] |
chr1H | 130507078 | 130510613 | r1 | Hordeum vulgare (Phytozome 13) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Hvulgare_HORVU1Hr1G026140.1 HORVU1Hr1G026140.1 |
High | No | 1094 | OG0012054 | Get ORF Coding potential... Type: noncoding Potential: -1.063 Folding energies... MFEI: -32.358 AMFE: -0.573 GC content %: 56.490 | |
Hvulgare_HORVU1Hr1G026140.2 HORVU1Hr1G026140.2 |
High | No | 571 | OG0036130 | Get ORF Coding potential... Type: noncoding Potential: -1.111 Folding energies... MFEI: -25.499 AMFE: -0.535 GC content %: 47.636 | |
Hvulgare_HORVU1Hr1G026140.3 HORVU1Hr1G026140.3 |
High | No | 268 | OG0036131 | Get ORF Coding potential... Type: noncoding Potential: -1.117 Folding energies... MFEI: -40.858 AMFE: -0.622 GC content %: 65.672 | |
Hvulgare_HORVU1Hr1G026140.4 HORVU1Hr1G026140.4 |
High | No | 341 | OG0012054 | Get ORF Coding potential... Type: noncoding Potential: -0.987 Folding energies... MFEI: -28.065 AMFE: -0.553 GC content %: 50.733 | |
Hvulgare_HORVU1Hr1G026140.5 HORVU1Hr1G026140.5 |
High | No | 1427 | OG0036132 | Get ORF Coding potential... Type: noncoding Potential: -1.281 Folding energies... MFEI: -28.353 AMFE: -0.685 GC content %: 41.416 |