Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Hvulgare_HORVU1Hr1G075200 [ HORVU1Hr1G075200] |
chr1H | 510256013 | 510258213 | r1 | Hordeum vulgare (Phytozome 13) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Hvulgare_HORVU1Hr1G075200.1 HORVU1Hr1G075200.1 |
High | No | 1206 | OG0037065 | Get ORF Coding potential... Type: noncoding Potential: -1.190 Folding energies... MFEI: -31.003 AMFE: -0.637 GC content %: 48.673 | |
Hvulgare_HORVU1Hr1G075200.2 HORVU1Hr1G075200.2 |
High | No | 1129 | OG0037066 | Get ORF Coding potential... Type: noncoding Potential: -1.210 Folding energies... MFEI: -35.332 AMFE: -0.678 GC content %: 52.081 | |
Hvulgare_HORVU1Hr1G075200.3 HORVU1Hr1G075200.3 |
High | No | 1129 | OG0037067 | Get ORF Coding potential... Type: noncoding Potential: -1.210 Folding energies... MFEI: -35.819 AMFE: -0.685 GC content %: 52.259 | |
Hvulgare_HORVU1Hr1G075200.4 HORVU1Hr1G075200.4 |
High | No | 841 | OG0037068 | Get ORF Coding potential... Type: noncoding Potential: -1.162 Folding energies... MFEI: -35.172 AMFE: -0.669 GC content %: 52.556 |