Hvulgare HORVU2Hr1G027050

From GreeNC


Gene information
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This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Assembly Species Details

Hvulgare_HORVU2Hr1G027050
[ HORVU2Hr1G027050]
chr2H 88610756 88622722 r1 Hordeum vulgare (Phytozome 13)
Coding?
Yes


Transcript features
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This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Orthologous group Sequence Details

Hvulgare_HORVU2Hr1G027050.4
HORVU2Hr1G027050.4
High No 351 OG0038098
Coding potential...
Type: noncoding Potential: -0.669
Folding energies...
MFEI: -34.929 AMFE: -0.538
GC content
%: 64.957
Hvulgare_HORVU2Hr1G027050.5
HORVU2Hr1G027050.5
High No 277 OG0192444
Coding potential...
Type: noncoding Potential: -0.916
Folding energies...
MFEI: -35.126 AMFE: -0.512
GC content
%: 68.592


Gene models
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Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

Hvulgare_HORVU2Hr1G027050.png